Revision history for Bio::BPWrappers

1.12 2016-07-01:
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bioaln:

 - Allow BLAST input in bioaln

biotree:
 - make biotree -m more efficent by avoiding pair-wise
   OTU distances
 - Add options:
    --label-selected-nodes
    --del-low-boot
    --mid-point
    --as-text
 - change option --distance to --dist

Bio::BPWrapper::SeqManipulations:
 - Added support for IUPAC codes
 - Added support for multimple sequence files
   when performing restriction analyses

Correct and expand documentation, add PDF reference


1.11 2016-07-01:
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- Another attempt to mollify smokers

1.10 2016-07-01:
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- Adjust testing for MSWin yet again
- More doc improvements

1.08 2016-06-30:
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- Canonicalize biotree -llt output
- More doc updates

1.07 2016-06-30:
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- More complete documentation
- Address GNUMakefile testing issues on CPANTesters

1.06 2016-06-29:
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- Canonicalize bioaln --avpid floating point values
- Convert links from rocky to bioperl github namespace
- Start documenting Bio::BPWrapper::SeqManipulations
- Changes to decrease likelihood automated test failures
- misc doc changes

1.05 2016-06-28:
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- Try to addess OSX testing problems:
  test using long options
- Start package documentation:
  Bio::BPWrapper::AlnManipulations
- improve/standardize command-line documentation

1.04 2016-06-02:

- revise bioaln documentation
- force at least Perl 5.10 on CPAN install

1.03 2016-06-01:
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- Make behavior the same across more Platforms:
  use a bundled Getopt::Long. This addresses
  the majority of install problems we see on CPAN
- Revise bioseq doc

1.01 2016-05-26:
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- First CPAN release.

1.0  2015-02-10:
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- First release. contains two utilities with tests: bioseq & bioaln.
